Cluster: Rep_3176_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3176_c_105 | Rep_3176_c_105_39 | 33911 | 34924 | + | 9.B.146.1.6 |
| TC | Rep_3176_c_105 | Rep_3176_c_105_40 | 34951 | 36099 | + | 2.A.103.1.3 |
| CAZyme | Rep_3176_c_105 | Rep_3176_c_105_41 | 36127 | 37260 | + | GT28 |
Gene ID: Rep_3176_c_105_39
Type: TC
Location: 33911 - 34924 (+)
Type: TC
Location: 33911 - 34924 (+)
Gene ID: Rep_3176_c_105_40
Type: TC
Location: 34951 - 36099 (+)
Type: TC
Location: 34951 - 36099 (+)
Gene ID: Rep_3176_c_105_41
Type: CAZyme
Location: 36127 - 37260 (+)
Type: CAZyme
Location: 36127 - 37260 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3176_c_105_39 | vegetarian > omnivore | 1.27923 | 0.00082 |
| Rep_3176_c_105_41 | vegetarian > omnivore | 1.23833 | 0.00082 |