Cluster: Rep_3176_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3176_c_7 | Rep_3176_c_7_33 | 30540 | 32420 | + | CBM48 | GH13_9 |
| CAZyme | Rep_3176_c_7 | Rep_3176_c_7_34 | 32435 | 35917 | + | GH13_39 | GT5 |
| pfam | Rep_3176_c_7 | Rep_3176_c_7_35 | 35901 | 37181 | + | Patatin |
| TC | Rep_3176_c_7 | Rep_3176_c_7_36 | 37241 | 45094 | - | 1.C.39.4.6 |
| pfam | Rep_3176_c_7 | Rep_3176_c_7_37 | 45266 | 46837 | - | SLH | SLH | SLH |
| TC | Rep_3176_c_7 | Rep_3176_c_7_38 | 47248 | 49020 | + | 2.A.58.2.2 |
Gene ID: Rep_3176_c_7_33
Type: CAZyme
Location: 30540 - 32420 (+)
Type: CAZyme
Location: 30540 - 32420 (+)
Gene ID: Rep_3176_c_7_34
Type: CAZyme
Location: 32435 - 35917 (+)
Type: CAZyme
Location: 32435 - 35917 (+)
Gene ID: Rep_3176_c_7_35
Type: pfam
Location: 35901 - 37181 (+)
Type: pfam
Location: 35901 - 37181 (+)
Gene ID: Rep_3176_c_7_36
Type: TC
Location: 37241 - 45094 (-)
Type: TC
Location: 37241 - 45094 (-)
Gene ID: Rep_3176_c_7_37
Type: pfam
Location: 45266 - 46837 (-)
Type: pfam
Location: 45266 - 46837 (-)
Gene ID: Rep_3176_c_7_38
Type: TC
Location: 47248 - 49020 (+)
Type: TC
Location: 47248 - 49020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3176_c_7_33 | vegetarian > omnivore | 1.01759 | 0.00082 |
| Rep_3176_c_7_34 | vegetarian > omnivore | 1.09593 | 0.00082 |
| Rep_3176_c_7_35 | vegetarian > omnivore | 1.32783 | 0.00082 |