dbCAN Logo

Cluster: Rep_315_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_315_c_89 Rep_315_c_89_18 23965 25884 + GH146
NULL(UNKNOWN) Rep_315_c_89 Rep_315_c_89_19 25881 27104 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_315_c_89 Rep_315_c_89_20 27101 28981 + GH97
CAZyme Rep_315_c_89 Rep_315_c_89_21 29089 30306 + GH88
pfam Rep_315_c_89 Rep_315_c_89_22 30320 31243 + PMI_typeI_cat
sulfatase Rep_315_c_89 Rep_315_c_89_23 31257 32381 + S1_27
CAZyme Rep_315_c_89 Rep_315_c_89_24 32378 33835 + GH28
TF Rep_315_c_89 Rep_315_c_89_25 33970 34803 - HTH_AraC
CAZyme Rep_315_c_89 Rep_315_c_89_26 34853 37513 - GH39 | GH43_19
pfam Rep_315_c_89 Rep_315_c_89_27 37527 38819 - DUF362
TC Rep_315_c_89 Rep_315_c_89_28 38829 39878 - 8.A.5.1.6
Gene ID: Rep_315_c_89_18
Type: CAZyme
Location: 23965 - 25884 (+)
Gene ID: Rep_315_c_89_19
Type:
Location: 25881 - 27104 (+)
Gene ID: Rep_315_c_89_20
Type: CAZyme
Location: 27101 - 28981 (+)
Gene ID: Rep_315_c_89_21
Type: CAZyme
Location: 29089 - 30306 (+)
Gene ID: Rep_315_c_89_22
Type: pfam
Location: 30320 - 31243 (+)
Gene ID: Rep_315_c_89_23
Type: sulfatase
Location: 31257 - 32381 (+)
Gene ID: Rep_315_c_89_24
Type: CAZyme
Location: 32378 - 33835 (+)
Gene ID: Rep_315_c_89_25
Type: TF
Location: 33970 - 34803 (-)
Gene ID: Rep_315_c_89_26
Type: CAZyme
Location: 34853 - 37513 (-)
Gene ID: Rep_315_c_89_27
Type: pfam
Location: 37527 - 38819 (-)
Gene ID: Rep_315_c_89_28
Type: TC
Location: 38829 - 39878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List