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Cluster: Rep_315_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_315_c_211 Rep_315_c_211_2 1287 2954 + 4.C.1.1.15
peptidase Rep_315_c_211 Rep_315_c_211_3 3035 4678 + C69.UPW
TC Rep_315_c_211 Rep_315_c_211_4 4781 6847 + 3.A.18.1.1
pfam Rep_315_c_211 Rep_315_c_211_5 6873 7529 + DUF3256
pfam Rep_315_c_211 Rep_315_c_211_6 7621 9150 + tRNA-synt_1c | Anticodon_2
CAZyme Rep_315_c_211 Rep_315_c_211_7 9147 10478 + GT30
pfam Rep_315_c_211 Rep_315_c_211_8 10689 11480 + adh_short | KR | adh_short_C2 | SDR
TC Rep_315_c_211 Rep_315_c_211_9 11628 13049 + 4.A.5.1.4
Gene ID: Rep_315_c_211_2
Type: TC
Location: 1287 - 2954 (+)
Gene ID: Rep_315_c_211_3
Type: peptidase
Location: 3035 - 4678 (+)
Gene ID: Rep_315_c_211_4
Type: TC
Location: 4781 - 6847 (+)
Gene ID: Rep_315_c_211_5
Type: pfam
Location: 6873 - 7529 (+)
Gene ID: Rep_315_c_211_6
Type: pfam
Location: 7621 - 9150 (+)
Gene ID: Rep_315_c_211_7
Type: CAZyme
Location: 9147 - 10478 (+)
Gene ID: Rep_315_c_211_8
Type: pfam
Location: 10689 - 11480 (+)
Gene ID: Rep_315_c_211_9
Type: TC
Location: 11628 - 13049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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