Cluster: Rep_3138_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3138_c_30 | Rep_3138_c_30_14 | 13725 | 14090 | - | 3.A.11.2.1 |
| peptidase | Rep_3138_c_30 | Rep_3138_c_30_15 | 14208 | 15833 | + | S11.004 |
| CAZyme | Rep_3138_c_30 | Rep_3138_c_30_16 | 15894 | 18218 | + | GH3 |
Gene ID: Rep_3138_c_30_14
Type: TC
Location: 13725 - 14090 (-)
Type: TC
Location: 13725 - 14090 (-)
Gene ID: Rep_3138_c_30_15
Type: peptidase
Location: 14208 - 15833 (+)
Type: peptidase
Location: 14208 - 15833 (+)
Gene ID: Rep_3138_c_30_16
Type: CAZyme
Location: 15894 - 18218 (+)
Type: CAZyme
Location: 15894 - 18218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp958428885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3138_c_30_14 | vegetarian > vegan | 2.25688 | 0.00353 |
| Rep_3138_c_30_15 | vegetarian > vegan | 2.44414 | 0.00353 |
| Rep_3138_c_30_16 | vegetarian > vegan | 1.86624 | 0.00353 |