Cluster: Rep_3138_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3138_c_128 | Rep_3138_c_128_28 | 29927 | 31564 | + | 3.A.1.117.3 |
| TC | Rep_3138_c_128 | Rep_3138_c_128_29 | 31805 | 32509 | + | 9.B.120.1.1 |
| pfam | Rep_3138_c_128 | Rep_3138_c_128_30 | 32506 | 33393 | + | EamA | EamA |
| CAZyme | Rep_3138_c_128 | Rep_3138_c_128_31 | 33454 | 34410 | + | GH25 |
Gene ID: Rep_3138_c_128_28
Type: TC
Location: 29927 - 31564 (+)
Type: TC
Location: 29927 - 31564 (+)
Gene ID: Rep_3138_c_128_29
Type: TC
Location: 31805 - 32509 (+)
Type: TC
Location: 31805 - 32509 (+)
Gene ID: Rep_3138_c_128_30
Type: pfam
Location: 32506 - 33393 (+)
Type: pfam
Location: 32506 - 33393 (+)
Gene ID: Rep_3138_c_128_31
Type: CAZyme
Location: 33454 - 34410 (+)
Type: CAZyme
Location: 33454 - 34410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp958428885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3138_c_128_31 | vegetarian > vegan | 1.89029 | 0.00353 |