Cluster: Rep_3138_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3138_c_87 | Rep_3138_c_87_1 | 47 | 1168 | - | GT28 |
| TC | Rep_3138_c_87 | Rep_3138_c_87_2 | 1194 | 2348 | - | 2.A.103.1.3 |
| TC | Rep_3138_c_87 | Rep_3138_c_87_3 | 2386 | 3399 | - | 9.B.146.1.6 |
Gene ID: Rep_3138_c_87_1
Type: CAZyme
Location: 47 - 1168 (-)
Type: CAZyme
Location: 47 - 1168 (-)
Gene ID: Rep_3138_c_87_2
Type: TC
Location: 1194 - 2348 (-)
Type: TC
Location: 1194 - 2348 (-)
Gene ID: Rep_3138_c_87_3
Type: TC
Location: 2386 - 3399 (-)
Type: TC
Location: 2386 - 3399 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp958428885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3138_c_87_1 | vegetarian > vegan | 1.78397 | 0.00353 |
| Rep_3138_c_87_2 | vegetarian > vegan | 1.17434 | 0.00353 |
| Rep_3138_c_87_3 | vegetarian > omnivore | 1.08669 | 0.00066 |