Cluster: Rep_3138_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3138
- CGC Family ID: CGCFAM_02525
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3138_c_75 | Rep_3138_c_75_43 | 46060 | 47679 | - | GH66 |
| TC | Rep_3138_c_75 | Rep_3138_c_75_44 | 47682 | 48554 | - | 3.A.1.1.18 |
| TC | Rep_3138_c_75 | Rep_3138_c_75_45 | 48556 | 49494 | - | 3.A.1.1.20 |
| TC | Rep_3138_c_75 | Rep_3138_c_75_46 | 49553 | 50839 | - | 3.A.1.1.16 |
Gene ID: Rep_3138_c_75_43
Type: CAZyme
Location: 46060 - 47679 (-)
Type: CAZyme
Location: 46060 - 47679 (-)
Gene ID: Rep_3138_c_75_44
Type: TC
Location: 47682 - 48554 (-)
Type: TC
Location: 47682 - 48554 (-)
Gene ID: Rep_3138_c_75_45
Type: TC
Location: 48556 - 49494 (-)
Type: TC
Location: 48556 - 49494 (-)
Gene ID: Rep_3138_c_75_46
Type: TC
Location: 49553 - 50839 (-)
Type: TC
Location: 49553 - 50839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp958428885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3138_c_75_43 | vegetarian > vegan | 3.27536 | 0.00353 |
| Rep_3138_c_75_44 | vegetarian > vegan | 1.24382 | 0.00353 |
| Rep_3138_c_75_45 | vegetarian > vegan | 1.00659 | 0.00353 |