Cluster: Rep_3138_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3138_c_54 | Rep_3138_c_54_5 | 4422 | 11342 | - | GH94 | GT84 |
| TF | Rep_3138_c_54 | Rep_3138_c_54_6 | 11511 | 11861 | + | HTH_11 |
| TC | Rep_3138_c_54 | Rep_3138_c_54_7 | 11875 | 13239 | + | 3.A.5.1.1 |
Gene ID: Rep_3138_c_54_5
Type: CAZyme
Location: 4422 - 11342 (-)
Type: CAZyme
Location: 4422 - 11342 (-)
Gene ID: Rep_3138_c_54_6
Type: TF
Location: 11511 - 11861 (+)
Type: TF
Location: 11511 - 11861 (+)
Gene ID: Rep_3138_c_54_7
Type: TC
Location: 11875 - 13239 (+)
Type: TC
Location: 11875 - 13239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp958428885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3138_c_54_5 | vegetarian > vegan | 1.65103 | 0.00353 |