Cluster: Rep_3115_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3115
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3115_c_3 | Rep_3115_c_3_81 | 89432 | 90457 | - | 2.A.35.1.5 |
| pfam | Rep_3115_c_3 | Rep_3115_c_3_82 | 90594 | 91445 | + | PAP2 |
| pfam | Rep_3115_c_3 | Rep_3115_c_3_83 | 91511 | 93064 | - | Big_3 |
| CAZyme | Rep_3115_c_3 | Rep_3115_c_3_84 | 93250 | 94932 | + | GH13_31 |
Gene ID: Rep_3115_c_3_81
Type: TC
Location: 89432 - 90457 (-)
Type: TC
Location: 89432 - 90457 (-)
Gene ID: Rep_3115_c_3_82
Type: pfam
Location: 90594 - 91445 (+)
Type: pfam
Location: 90594 - 91445 (+)
Gene ID: Rep_3115_c_3_83
Type: pfam
Location: 91511 - 93064 (-)
Type: pfam
Location: 91511 - 93064 (-)
Gene ID: Rep_3115_c_3_84
Type: CAZyme
Location: 93250 - 94932 (+)
Type: CAZyme
Location: 93250 - 94932 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp934573855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.