Cluster: Rep_3115_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3115
- CGC Family ID: CGCFAM_06076
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3115_c_3 | Rep_3115_c_3_29 | 32610 | 34814 | + | GT51 |
| NULL(UNKNOWN) | Rep_3115_c_3 | Rep_3115_c_3_30 | 35020 | 35307 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_3115_c_3 | Rep_3115_c_3_31 | 35324 | 36925 | + | C40.UPW |
| TC | Rep_3115_c_3 | Rep_3115_c_3_32 | 36997 | 37560 | - | 2.A.51.1.6 |
| TC | Rep_3115_c_3 | Rep_3115_c_3_33 | 37557 | 38120 | - | 2.A.51.1.6 |
Gene ID: Rep_3115_c_3_29
Type: CAZyme
Location: 32610 - 34814 (+)
Type: CAZyme
Location: 32610 - 34814 (+)
Gene ID: Rep_3115_c_3_30
Type:
Location: 35020 - 35307 (+)
Type:
Location: 35020 - 35307 (+)
Gene ID: Rep_3115_c_3_31
Type: peptidase
Location: 35324 - 36925 (+)
Type: peptidase
Location: 35324 - 36925 (+)
Gene ID: Rep_3115_c_3_32
Type: TC
Location: 36997 - 37560 (-)
Type: TC
Location: 36997 - 37560 (-)
Gene ID: Rep_3115_c_3_33
Type: TC
Location: 37557 - 38120 (-)
Type: TC
Location: 37557 - 38120 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp934573855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.