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Cluster: Rep_3115_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3115_c_21 Rep_3115_c_21_1 49 1497 - 2.A.38.1.1
TC Rep_3115_c_21 Rep_3115_c_21_2 1500 2858 - 2.A.38.1.1
pfam Rep_3115_c_21 Rep_3115_c_21_3 2999 3682 + DUF2461
CAZyme Rep_3115_c_21 Rep_3115_c_21_4 3683 4723 + GT2
peptidase Rep_3115_c_21 Rep_3115_c_21_5 4747 5670 + S09.B04
pfam Rep_3115_c_21 Rep_3115_c_21_6 5758 7062 - Band_7_1
TC Rep_3115_c_21 Rep_3115_c_21_7 7255 9084 + 3.A.1.106.8
TC Rep_3115_c_21 Rep_3115_c_21_8 9081 10907 + 3.A.1.135.5
Gene ID: Rep_3115_c_21_1
Type: TC
Location: 49 - 1497 (-)
Gene ID: Rep_3115_c_21_2
Type: TC
Location: 1500 - 2858 (-)
Gene ID: Rep_3115_c_21_3
Type: pfam
Location: 2999 - 3682 (+)
Gene ID: Rep_3115_c_21_4
Type: CAZyme
Location: 3683 - 4723 (+)
Gene ID: Rep_3115_c_21_5
Type: peptidase
Location: 4747 - 5670 (+)
Gene ID: Rep_3115_c_21_6
Type: pfam
Location: 5758 - 7062 (-)
Gene ID: Rep_3115_c_21_7
Type: TC
Location: 7255 - 9084 (+)
Gene ID: Rep_3115_c_21_8
Type: TC
Location: 9081 - 10907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3115_c_21_2 vegetarian > omnivore 2.20302 0.01878
Rep_3115_c_21_2 vegetarian > vegan 1.43953 0.00286

🧭 Explore Read Mapping of CGC

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