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Cluster: Rep_3115_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3115_c_7 Rep_3115_c_7_38 39201 40112 + 3.A.1.1.28
TC Rep_3115_c_7 Rep_3115_c_7_39 40129 40995 + 3.A.1.1.36
pfam Rep_3115_c_7 Rep_3115_c_7_40 41007 41972 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme Rep_3115_c_7 Rep_3115_c_7_41 41974 42666 + CE14
STP Rep_3115_c_7 Rep_3115_c_7_42 42687 43586 + SIS
CAZyme Rep_3115_c_7 Rep_3115_c_7_43 43588 44334 + CE1
pfam Rep_3115_c_7 Rep_3115_c_7_44 44349 45530 + AnmK
CAZyme Rep_3115_c_7 Rep_3115_c_7_45 45539 46675 + GH171
CAZyme Rep_3115_c_7 Rep_3115_c_7_46 46686 48248 + GH3
Gene ID: Rep_3115_c_7_38
Type: TC
Location: 39201 - 40112 (+)
Gene ID: Rep_3115_c_7_39
Type: TC
Location: 40129 - 40995 (+)
Gene ID: Rep_3115_c_7_40
Type: pfam
Location: 41007 - 41972 (+)
Gene ID: Rep_3115_c_7_41
Type: CAZyme
Location: 41974 - 42666 (+)
Gene ID: Rep_3115_c_7_42
Type: STP
Location: 42687 - 43586 (+)
Gene ID: Rep_3115_c_7_43
Type: CAZyme
Location: 43588 - 44334 (+)
Gene ID: Rep_3115_c_7_44
Type: pfam
Location: 44349 - 45530 (+)
Gene ID: Rep_3115_c_7_45
Type: CAZyme
Location: 45539 - 46675 (+)
Gene ID: Rep_3115_c_7_46
Type: CAZyme
Location: 46686 - 48248 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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