Cluster: Rep_3115_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3115
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3115_c_0 | Rep_3115_c_0_26 | 20943 | 27989 | - | GH94 | GT84 |
| TF | Rep_3115_c_0 | Rep_3115_c_0_27 | 28159 | 28509 | + | HTH_11 |
| TC | Rep_3115_c_0 | Rep_3115_c_0_28 | 28516 | 29877 | + | 3.A.5.1.1 |
Gene ID: Rep_3115_c_0_26
Type: CAZyme
Location: 20943 - 27989 (-)
Type: CAZyme
Location: 20943 - 27989 (-)
Gene ID: Rep_3115_c_0_27
Type: TF
Location: 28159 - 28509 (+)
Type: TF
Location: 28159 - 28509 (+)
Gene ID: Rep_3115_c_0_28
Type: TC
Location: 28516 - 29877 (+)
Type: TC
Location: 28516 - 29877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp934573855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.