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Cluster: Rep_30_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_30_c_6 Rep_30_c_6_99 106525 108009 - 3.D.1.1.1
TC Rep_30_c_6 Rep_30_c_6_100 108013 109488 - 3.D.1.5.1
TC Rep_30_c_6 Rep_30_c_6_101 109493 111439 - 3.D.1.3.1
TC Rep_30_c_6 Rep_30_c_6_102 111444 111746 - 3.D.1.3.1
TC Rep_30_c_6 Rep_30_c_6_103 111757 112275 - 3.D.1.2.1
TC Rep_30_c_6 Rep_30_c_6_104 112275 112817 - 3.D.1.6.3
TC Rep_30_c_6 Rep_30_c_6_105 112828 113994 - 3.D.1.5.1
TC Rep_30_c_6 Rep_30_c_6_106 113987 115651 - 3.D.1.6.4
TC Rep_30_c_6 Rep_30_c_6_107 115653 117017 - 3.D.1.6.3
pfam Rep_30_c_6 Rep_30_c_6_108 117021 117566 - 2Fe-2S_thioredx
TC Rep_30_c_6 Rep_30_c_6_109 117576 118823 - 3.D.1.5.1
TC Rep_30_c_6 Rep_30_c_6_110 118836 119429 - 3.D.1.5.1
TC Rep_30_c_6 Rep_30_c_6_111 119446 119949 - 3.D.1.5.1
CAZyme Rep_30_c_6 Rep_30_c_6_112 120482 121450 + GT2
TC Rep_30_c_6 Rep_30_c_6_113 121452 122111 + 1.C.113.1.10
TC Rep_30_c_6 Rep_30_c_6_114 122116 122739 + 1.C.113.1.10
Gene ID: Rep_30_c_6_99
Type: TC
Location: 106525 - 108009 (-)
Gene ID: Rep_30_c_6_100
Type: TC
Location: 108013 - 109488 (-)
Gene ID: Rep_30_c_6_101
Type: TC
Location: 109493 - 111439 (-)
Gene ID: Rep_30_c_6_102
Type: TC
Location: 111444 - 111746 (-)
Gene ID: Rep_30_c_6_103
Type: TC
Location: 111757 - 112275 (-)
Gene ID: Rep_30_c_6_104
Type: TC
Location: 112275 - 112817 (-)
Gene ID: Rep_30_c_6_105
Type: TC
Location: 112828 - 113994 (-)
Gene ID: Rep_30_c_6_106
Type: TC
Location: 113987 - 115651 (-)
Gene ID: Rep_30_c_6_107
Type: TC
Location: 115653 - 117017 (-)
Gene ID: Rep_30_c_6_108
Type: pfam
Location: 117021 - 117566 (-)
Gene ID: Rep_30_c_6_109
Type: TC
Location: 117576 - 118823 (-)
Gene ID: Rep_30_c_6_110
Type: TC
Location: 118836 - 119429 (-)
Gene ID: Rep_30_c_6_111
Type: TC
Location: 119446 - 119949 (-)
Gene ID: Rep_30_c_6_112
Type: CAZyme
Location: 120482 - 121450 (+)
Gene ID: Rep_30_c_6_113
Type: TC
Location: 121452 - 122111 (+)
Gene ID: Rep_30_c_6_114
Type: TC
Location: 122116 - 122739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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