Cluster: Rep_30_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_6 | Rep_30_c_6_57 | 55447 | 59202 | - | GH2 |
| NULL(UNKNOWN) | Rep_30_c_6 | Rep_30_c_6_58 | 59347 | 60435 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_30_c_6 | Rep_30_c_6_59 | 60851 | 62815 | + | GH97 |
| TC | Rep_30_c_6 | Rep_30_c_6_60 | 62979 | 64274 | - | 2.A.56.1.5 |
| pfam | Rep_30_c_6 | Rep_30_c_6_61 | 64271 | 64786 | - | DctQ |
| TC | Rep_30_c_6 | Rep_30_c_6_62 | 64797 | 65807 | - | 2.A.56.1.5 |
Gene ID: Rep_30_c_6_57
Type: CAZyme
Location: 55447 - 59202 (-)
Type: CAZyme
Location: 55447 - 59202 (-)
Gene ID: Rep_30_c_6_58
Type:
Location: 59347 - 60435 (-)
Type:
Location: 59347 - 60435 (-)
Gene ID: Rep_30_c_6_59
Type: CAZyme
Location: 60851 - 62815 (+)
Type: CAZyme
Location: 60851 - 62815 (+)
Gene ID: Rep_30_c_6_60
Type: TC
Location: 62979 - 64274 (-)
Type: TC
Location: 62979 - 64274 (-)
Gene ID: Rep_30_c_6_61
Type: pfam
Location: 64271 - 64786 (-)
Type: pfam
Location: 64271 - 64786 (-)
Gene ID: Rep_30_c_6_62
Type: TC
Location: 64797 - 65807 (-)
Type: TC
Location: 64797 - 65807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.