Cluster: Rep_30_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_10141
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_6 | Rep_30_c_6_16 | 17765 | 18214 | - | 3.A.15.1.1 |
| pfam | Rep_30_c_6 | Rep_30_c_6_17 | 18343 | 19776 | - | UDPGP |
| pfam | Rep_30_c_6 | Rep_30_c_6_18 | 20041 | 20637 | + | PvlArgDC |
| TC | Rep_30_c_6 | Rep_30_c_6_19 | 20654 | 22141 | + | 2.A.3.2.7 |
| CAZyme | Rep_30_c_6 | Rep_30_c_6_20 | 22226 | 24640 | + | GH163 |
Gene ID: Rep_30_c_6_16
Type: TC
Location: 17765 - 18214 (-)
Type: TC
Location: 17765 - 18214 (-)
Gene ID: Rep_30_c_6_17
Type: pfam
Location: 18343 - 19776 (-)
Type: pfam
Location: 18343 - 19776 (-)
Gene ID: Rep_30_c_6_18
Type: pfam
Location: 20041 - 20637 (+)
Type: pfam
Location: 20041 - 20637 (+)
Gene ID: Rep_30_c_6_19
Type: TC
Location: 20654 - 22141 (+)
Type: TC
Location: 20654 - 22141 (+)
Gene ID: Rep_30_c_6_20
Type: CAZyme
Location: 22226 - 24640 (+)
Type: CAZyme
Location: 22226 - 24640 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.