Cluster: Rep_30_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_10926
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_4 | Rep_30_c_4_6 | 7272 | 7661 | + | 3.D.1.8.1 |
| pfam | Rep_30_c_4 | Rep_30_c_4_7 | 7670 | 9010 | + | PTS_EIIA_2 | DAC | DacZ_P |
| CAZyme | Rep_30_c_4 | Rep_30_c_4_8 | 9167 | 10558 | + | GH109 |
Gene ID: Rep_30_c_4_6
Type: TC
Location: 7272 - 7661 (+)
Type: TC
Location: 7272 - 7661 (+)
Gene ID: Rep_30_c_4_7
Type: pfam
Location: 7670 - 9010 (+)
Type: pfam
Location: 7670 - 9010 (+)
Gene ID: Rep_30_c_4_8
Type: CAZyme
Location: 9167 - 10558 (+)
Type: CAZyme
Location: 9167 - 10558 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.