Cluster: Rep_30_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_05870
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_45 | Rep_30_c_45_80 | 100324 | 102834 | + | GT35 |
| NULL(UNKNOWN) | Rep_30_c_45 | Rep_30_c_45_81 | 103053 | 103937 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_30_c_45 | Rep_30_c_45_82 | 103941 | 105140 | + | LpxK |
| TC | Rep_30_c_45 | Rep_30_c_45_83 | 105333 | 107264 | + | 3.A.1.120.6 |
Gene ID: Rep_30_c_45_80
Type: CAZyme
Location: 100324 - 102834 (+)
Type: CAZyme
Location: 100324 - 102834 (+)
Gene ID: Rep_30_c_45_81
Type:
Location: 103053 - 103937 (+)
Type:
Location: 103053 - 103937 (+)
Gene ID: Rep_30_c_45_82
Type: pfam
Location: 103941 - 105140 (+)
Type: pfam
Location: 103941 - 105140 (+)
Gene ID: Rep_30_c_45_83
Type: TC
Location: 105333 - 107264 (+)
Type: TC
Location: 105333 - 107264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.