Cluster: Rep_30_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_45 | Rep_30_c_45_3 | 2766 | 4364 | - | CBM91 | GH43_10 |
| CAZyme | Rep_30_c_45 | Rep_30_c_45_4 | 4556 | 6454 | + | GH97 |
| CAZyme | Rep_30_c_45 | Rep_30_c_45_5 | 6479 | 8203 | + | CBM91 | GH43_12 |
| CAZyme | Rep_30_c_45 | Rep_30_c_45_6 | 8248 | 10020 | + | GH27 |
| TC | Rep_30_c_45 | Rep_30_c_45_7 | 10339 | 11094 | - | 1.B.6.3.2 |
Gene ID: Rep_30_c_45_3
Type: CAZyme
Location: 2766 - 4364 (-)
Type: CAZyme
Location: 2766 - 4364 (-)
Gene ID: Rep_30_c_45_4
Type: CAZyme
Location: 4556 - 6454 (+)
Type: CAZyme
Location: 4556 - 6454 (+)
Gene ID: Rep_30_c_45_5
Type: CAZyme
Location: 6479 - 8203 (+)
Type: CAZyme
Location: 6479 - 8203 (+)
Gene ID: Rep_30_c_45_6
Type: CAZyme
Location: 8248 - 10020 (+)
Type: CAZyme
Location: 8248 - 10020 (+)
Gene ID: Rep_30_c_45_7
Type: TC
Location: 10339 - 11094 (-)
Type: TC
Location: 10339 - 11094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.