Cluster: Rep_30_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_00084
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_30 | Rep_30_c_30_33 | 34058 | 35152 | + | 9.B.146.1.6 |
| pfam | Rep_30_c_30 | Rep_30_c_30_34 | 35155 | 36426 | + | Mur_ligase_M |
| peptidase | Rep_30_c_30 | Rep_30_c_30_35 | 36488 | 37588 | + | C40.UPW |
| TC | Rep_30_c_30 | Rep_30_c_30_36 | 37594 | 38733 | + | 2.A.103.1.3 |
| CAZyme | Rep_30_c_30 | Rep_30_c_30_37 | 38726 | 39823 | + | GT28 |
Gene ID: Rep_30_c_30_33
Type: TC
Location: 34058 - 35152 (+)
Type: TC
Location: 34058 - 35152 (+)
Gene ID: Rep_30_c_30_34
Type: pfam
Location: 35155 - 36426 (+)
Type: pfam
Location: 35155 - 36426 (+)
Gene ID: Rep_30_c_30_35
Type: peptidase
Location: 36488 - 37588 (+)
Type: peptidase
Location: 36488 - 37588 (+)
Gene ID: Rep_30_c_30_36
Type: TC
Location: 37594 - 38733 (+)
Type: TC
Location: 37594 - 38733 (+)
Gene ID: Rep_30_c_30_37
Type: CAZyme
Location: 38726 - 39823 (+)
Type: CAZyme
Location: 38726 - 39823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.