Cluster: Rep_30_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_24 | Rep_30_c_24_2 | 1447 | 3351 | - | 3.A.1.120.6 |
| CAZyme | Rep_30_c_24 | Rep_30_c_24_3 | 4484 | 7267 | + | CBM42 | GH2 |
| STP | Rep_30_c_24 | Rep_30_c_24_4 | 7759 | 8559 | - | HTH_IclR | IclR |
| TC | Rep_30_c_24 | Rep_30_c_24_5 | 8644 | 13134 | - | 9.A.25.1.1 |
Gene ID: Rep_30_c_24_2
Type: TC
Location: 1447 - 3351 (-)
Type: TC
Location: 1447 - 3351 (-)
Gene ID: Rep_30_c_24_3
Type: CAZyme
Location: 4484 - 7267 (+)
Type: CAZyme
Location: 4484 - 7267 (+)
Gene ID: Rep_30_c_24_4
Type: STP
Location: 7759 - 8559 (-)
Type: STP
Location: 7759 - 8559 (-)
Gene ID: Rep_30_c_24_5
Type: TC
Location: 8644 - 13134 (-)
Type: TC
Location: 8644 - 13134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.