Cluster: Rep_30_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_3 | Rep_30_c_3_61 | 52801 | 56088 | - | CBM57 | GH2 |
| CAZyme | Rep_30_c_3 | Rep_30_c_3_62 | 56260 | 58140 | - | CBM32 | GH43_28 |
| NULL(UNKNOWN) | Rep_30_c_3 | Rep_30_c_3_63 | 58263 | 60812 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_30_c_3 | Rep_30_c_3_64 | 61387 | 61548 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_30_c_3 | Rep_30_c_3_65 | 61621 | 63957 | + | GH51_2 |
| pfam | Rep_30_c_3 | Rep_30_c_3_66 | 64363 | 65550 | - | Sulfatase | Phosphodiest | Metalloenzyme |
| TC | Rep_30_c_3 | Rep_30_c_3_67 | 65637 | 67778 | - | 9.A.8.1.6 |
Gene ID: Rep_30_c_3_61
Type: CAZyme
Location: 52801 - 56088 (-)
Type: CAZyme
Location: 52801 - 56088 (-)
Gene ID: Rep_30_c_3_62
Type: CAZyme
Location: 56260 - 58140 (-)
Type: CAZyme
Location: 56260 - 58140 (-)
Gene ID: Rep_30_c_3_63
Type:
Location: 58263 - 60812 (-)
Type:
Location: 58263 - 60812 (-)
Gene ID: Rep_30_c_3_64
Type:
Location: 61387 - 61548 (-)
Type:
Location: 61387 - 61548 (-)
Gene ID: Rep_30_c_3_65
Type: CAZyme
Location: 61621 - 63957 (+)
Type: CAZyme
Location: 61621 - 63957 (+)
Gene ID: Rep_30_c_3_66
Type: pfam
Location: 64363 - 65550 (-)
Type: pfam
Location: 64363 - 65550 (-)
Gene ID: Rep_30_c_3_67
Type: TC
Location: 65637 - 67778 (-)
Type: TC
Location: 65637 - 67778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.