Cluster: Rep_30_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_19 | Rep_30_c_19_68 | 78145 | 81810 | - | GH2 |
| pfam | Rep_30_c_19 | Rep_30_c_19_69 | 82334 | 83440 | + | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| pfam | Rep_30_c_19 | Rep_30_c_19_70 | 83462 | 84205 | + | ResB |
| TC | Rep_30_c_19 | Rep_30_c_19_71 | 84202 | 85989 | + | 9.B.14.3.3 |
| TC | Rep_30_c_19 | Rep_30_c_19_72 | 86054 | 87439 | - | 2.A.6.2.18 |
| TC | Rep_30_c_19 | Rep_30_c_19_73 | 87432 | 88778 | - | 3.A.1.122.2 |
| TC | Rep_30_c_19 | Rep_30_c_19_74 | 88778 | 89470 | - | 3.A.1.122.2 |
Gene ID: Rep_30_c_19_68
Type: CAZyme
Location: 78145 - 81810 (-)
Type: CAZyme
Location: 78145 - 81810 (-)
Gene ID: Rep_30_c_19_69
Type: pfam
Location: 82334 - 83440 (+)
Type: pfam
Location: 82334 - 83440 (+)
Gene ID: Rep_30_c_19_70
Type: pfam
Location: 83462 - 84205 (+)
Type: pfam
Location: 83462 - 84205 (+)
Gene ID: Rep_30_c_19_71
Type: TC
Location: 84202 - 85989 (+)
Type: TC
Location: 84202 - 85989 (+)
Gene ID: Rep_30_c_19_72
Type: TC
Location: 86054 - 87439 (-)
Type: TC
Location: 86054 - 87439 (-)
Gene ID: Rep_30_c_19_73
Type: TC
Location: 87432 - 88778 (-)
Type: TC
Location: 87432 - 88778 (-)
Gene ID: Rep_30_c_19_74
Type: TC
Location: 88778 - 89470 (-)
Type: TC
Location: 88778 - 89470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.