Cluster: Rep_30_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_15 | Rep_30_c_15_64 | 69652 | 70353 | - | 1.A.14.3.7 |
| TC | Rep_30_c_15 | Rep_30_c_15_65 | 70406 | 71185 | - | 1.A.1.17.1 |
| pfam | Rep_30_c_15 | Rep_30_c_15_66 | 71427 | 72362 | - | PMI_typeI_cat |
| TC | Rep_30_c_15 | Rep_30_c_15_67 | 72482 | 73243 | + | 2.A.102.2.5 |
| CAZyme | Rep_30_c_15 | Rep_30_c_15_68 | 73321 | 74109 | - | CE1 |
Gene ID: Rep_30_c_15_64
Type: TC
Location: 69652 - 70353 (-)
Type: TC
Location: 69652 - 70353 (-)
Gene ID: Rep_30_c_15_65
Type: TC
Location: 70406 - 71185 (-)
Type: TC
Location: 70406 - 71185 (-)
Gene ID: Rep_30_c_15_66
Type: pfam
Location: 71427 - 72362 (-)
Type: pfam
Location: 71427 - 72362 (-)
Gene ID: Rep_30_c_15_67
Type: TC
Location: 72482 - 73243 (+)
Type: TC
Location: 72482 - 73243 (+)
Gene ID: Rep_30_c_15_68
Type: CAZyme
Location: 73321 - 74109 (-)
Type: CAZyme
Location: 73321 - 74109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.