Cluster: Rep_30_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_10925
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_13 | Rep_30_c_13_11 | 10081 | 13098 | + | 3.A.5.1.1 |
| pfam | Rep_30_c_13 | Rep_30_c_13_12 | 13130 | 14914 | + | CN_hydrolase | LNT_N |
| pfam | Rep_30_c_13 | Rep_30_c_13_13 | 15124 | 15984 | + | HisG | HisG_C |
| CAZyme | Rep_30_c_13 | Rep_30_c_13_14 | 16279 | 17763 | + | CE20 |
Gene ID: Rep_30_c_13_11
Type: TC
Location: 10081 - 13098 (+)
Type: TC
Location: 10081 - 13098 (+)
Gene ID: Rep_30_c_13_12
Type: pfam
Location: 13130 - 14914 (+)
Type: pfam
Location: 13130 - 14914 (+)
Gene ID: Rep_30_c_13_13
Type: pfam
Location: 15124 - 15984 (+)
Type: pfam
Location: 15124 - 15984 (+)
Gene ID: Rep_30_c_13_14
Type: CAZyme
Location: 16279 - 17763 (+)
Type: CAZyme
Location: 16279 - 17763 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.