Cluster: Rep_30_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_30
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_12 | Rep_30_c_12_35 | 48671 | 50692 | - | 1.B.14.9.5 |
| pfam | Rep_30_c_12 | Rep_30_c_12_36 | 50747 | 51610 | - | DUF4465 |
| CAZyme | Rep_30_c_12 | Rep_30_c_12_37 | 52181 | 55894 | + | GH2 |
| CAZyme | Rep_30_c_12 | Rep_30_c_12_38 | 56109 | 57437 | + | GH99 |
| TC | Rep_30_c_12 | Rep_30_c_12_39 | 57443 | 59791 | + | 2.A.21.3.8 |
| pfam | Rep_30_c_12 | Rep_30_c_12_40 | 60071 | 61735 | + | SMC_N | AAA_23 |
| TC | Rep_30_c_12 | Rep_30_c_12_41 | 61737 | 64406 | + | 3.A.12.1.1 |
Gene ID: Rep_30_c_12_35
Type: TC
Location: 48671 - 50692 (-)
Type: TC
Location: 48671 - 50692 (-)
Gene ID: Rep_30_c_12_36
Type: pfam
Location: 50747 - 51610 (-)
Type: pfam
Location: 50747 - 51610 (-)
Gene ID: Rep_30_c_12_37
Type: CAZyme
Location: 52181 - 55894 (+)
Type: CAZyme
Location: 52181 - 55894 (+)
Gene ID: Rep_30_c_12_38
Type: CAZyme
Location: 56109 - 57437 (+)
Type: CAZyme
Location: 56109 - 57437 (+)
Gene ID: Rep_30_c_12_39
Type: TC
Location: 57443 - 59791 (+)
Type: TC
Location: 57443 - 59791 (+)
Gene ID: Rep_30_c_12_40
Type: pfam
Location: 60071 - 61735 (+)
Type: pfam
Location: 60071 - 61735 (+)
Gene ID: Rep_30_c_12_41
Type: TC
Location: 61737 - 64406 (+)
Type: TC
Location: 61737 - 64406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.