Cluster: Rep_30_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_00875
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_30_c_12 | Rep_30_c_12_27 | 33000 | 34652 | - | CE20 |
| STP | Rep_30_c_12 | Rep_30_c_12_28 | 35342 | 38878 | + | Fer4 | Fer4 |
| TC | Rep_30_c_12 | Rep_30_c_12_29 | 39278 | 40744 | - | 2.A.6.2.44 |
| TC | Rep_30_c_12 | Rep_30_c_12_30 | 40759 | 43920 | - | 2.A.6.2.16 |
| TC | Rep_30_c_12 | Rep_30_c_12_31 | 43944 | 45089 | - | 2.A.6.2.44 |
Gene ID: Rep_30_c_12_27
Type: CAZyme
Location: 33000 - 34652 (-)
Type: CAZyme
Location: 33000 - 34652 (-)
Gene ID: Rep_30_c_12_28
Type: STP
Location: 35342 - 38878 (+)
Type: STP
Location: 35342 - 38878 (+)
Gene ID: Rep_30_c_12_29
Type: TC
Location: 39278 - 40744 (-)
Type: TC
Location: 39278 - 40744 (-)
Gene ID: Rep_30_c_12_30
Type: TC
Location: 40759 - 43920 (-)
Type: TC
Location: 40759 - 43920 (-)
Gene ID: Rep_30_c_12_31
Type: TC
Location: 43944 - 45089 (-)
Type: TC
Location: 43944 - 45089 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.