Cluster: Rep_30_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_30
- CGC Family ID: CGCFAM_10927
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_30_c_3 | Rep_30_c_3_20 | 16199 | 17905 | - | 2.A.21.3.19 |
| pfam | Rep_30_c_3 | Rep_30_c_3_21 | 17926 | 18624 | - | Aldolase_II |
| pfam | Rep_30_c_3 | Rep_30_c_3_22 | 18626 | 20296 | - | FGGY_N | FGGY_C |
| CAZyme | Rep_30_c_3 | Rep_30_c_3_23 | 20388 | 23717 | + | GH2 |
Gene ID: Rep_30_c_3_20
Type: TC
Location: 16199 - 17905 (-)
Type: TC
Location: 16199 - 17905 (-)
Gene ID: Rep_30_c_3_21
Type: pfam
Location: 17926 - 18624 (-)
Type: pfam
Location: 17926 - 18624 (-)
Gene ID: Rep_30_c_3_22
Type: pfam
Location: 18626 - 20296 (-)
Type: pfam
Location: 18626 - 20296 (-)
Gene ID: Rep_30_c_3_23
Type: CAZyme
Location: 20388 - 23717 (+)
Type: CAZyme
Location: 20388 - 23717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
UMGS1490
Species
UMGS1490 sp900552245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.