dbCAN Logo

Cluster: Rep_309_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_309_c_11 Rep_309_c_11_22 23871 24530 + 2.A.115.2.14
TC Rep_309_c_11 Rep_309_c_11_23 24505 25908 - 9.B.126.2.2
CAZyme Rep_309_c_11 Rep_309_c_11_24 26480 28864 + GH2
pfam Rep_309_c_11 Rep_309_c_11_25 28938 30590 - AMP-binding | AMP-binding_C
CAZyme Rep_309_c_11 Rep_309_c_11_26 30980 32440 - GH57
CAZyme Rep_309_c_11 Rep_309_c_11_27 32457 33704 - GT4
CAZyme Rep_309_c_11 Rep_309_c_11_28 33735 35687 - GH133
TC Rep_309_c_11 Rep_309_c_11_29 36002 37465 - 3.D.9.1.1
TC Rep_309_c_11 Rep_309_c_11_30 37493 39010 - 3.D.1.2.1
TC Rep_309_c_11 Rep_309_c_11_31 39037 41022 - 3.D.1.2.1
TC Rep_309_c_11 Rep_309_c_11_32 41025 41336 - 3.D.1.2.1
pfam Rep_309_c_11 Rep_309_c_11_33 41342 41869 - Oxidored_q3
STP Rep_309_c_11 Rep_309_c_11_34 41910 42485 - Fer4 | Fer4
TC Rep_309_c_11 Rep_309_c_11_35 42531 43406 - 3.A.2.1.1
TC Rep_309_c_11 Rep_309_c_11_36 43426 45009 - 3.A.2.1.3
pfam Rep_309_c_11 Rep_309_c_11_37 45011 45559 - OSCP
pfam Rep_309_c_11 Rep_309_c_11_38 45564 46058 - ATP-synt_B | Mt_ATP-synt_B
TC Rep_309_c_11 Rep_309_c_11_39 46139 46408 - 3.A.2.1.6
TC Rep_309_c_11 Rep_309_c_11_40 46449 47825 - 3.A.2.1.6
pfam Rep_309_c_11 Rep_309_c_11_41 47862 48098 - ATP-synt_DE_N
TC Rep_309_c_11 Rep_309_c_11_42 48106 49608 - 3.A.2.1.2
TC Rep_309_c_11 Rep_309_c_11_43 49637 50716 - 3.D.1.5.1
TC Rep_309_c_11 Rep_309_c_11_44 50756 52381 - 3.D.1.5.1
TC Rep_309_c_11 Rep_309_c_11_45 52388 53002 - 3.D.1.6.1
TC Rep_309_c_11 Rep_309_c_11_46 52993 53364 - 3.D.1.8.1
Gene ID: Rep_309_c_11_22
Type: TC
Location: 23871 - 24530 (+)
Gene ID: Rep_309_c_11_23
Type: TC
Location: 24505 - 25908 (-)
Gene ID: Rep_309_c_11_24
Type: CAZyme
Location: 26480 - 28864 (+)
Gene ID: Rep_309_c_11_25
Type: pfam
Location: 28938 - 30590 (-)
Gene ID: Rep_309_c_11_26
Type: CAZyme
Location: 30980 - 32440 (-)
Gene ID: Rep_309_c_11_27
Type: CAZyme
Location: 32457 - 33704 (-)
Gene ID: Rep_309_c_11_28
Type: CAZyme
Location: 33735 - 35687 (-)
Gene ID: Rep_309_c_11_29
Type: TC
Location: 36002 - 37465 (-)
Gene ID: Rep_309_c_11_30
Type: TC
Location: 37493 - 39010 (-)
Gene ID: Rep_309_c_11_31
Type: TC
Location: 39037 - 41022 (-)
Gene ID: Rep_309_c_11_32
Type: TC
Location: 41025 - 41336 (-)
Gene ID: Rep_309_c_11_33
Type: pfam
Location: 41342 - 41869 (-)
Gene ID: Rep_309_c_11_34
Type: STP
Location: 41910 - 42485 (-)
Gene ID: Rep_309_c_11_35
Type: TC
Location: 42531 - 43406 (-)
Gene ID: Rep_309_c_11_36
Type: TC
Location: 43426 - 45009 (-)
Gene ID: Rep_309_c_11_37
Type: pfam
Location: 45011 - 45559 (-)
Gene ID: Rep_309_c_11_38
Type: pfam
Location: 45564 - 46058 (-)
Gene ID: Rep_309_c_11_39
Type: TC
Location: 46139 - 46408 (-)
Gene ID: Rep_309_c_11_40
Type: TC
Location: 46449 - 47825 (-)
Gene ID: Rep_309_c_11_41
Type: pfam
Location: 47862 - 48098 (-)
Gene ID: Rep_309_c_11_42
Type: TC
Location: 48106 - 49608 (-)
Gene ID: Rep_309_c_11_43
Type: TC
Location: 49637 - 50716 (-)
Gene ID: Rep_309_c_11_44
Type: TC
Location: 50756 - 52381 (-)
Gene ID: Rep_309_c_11_45
Type: TC
Location: 52388 - 53002 (-)
Gene ID: Rep_309_c_11_46
Type: TC
Location: 52993 - 53364 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List