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Cluster: Rep_309_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_309_c_120 Rep_309_c_120_7 10405 11637 + 2.A.1.7.1
STP Rep_309_c_120 Rep_309_c_120_8 11642 12559 + PfkB
CAZyme Rep_309_c_120 Rep_309_c_120_9 12531 14777 - GH92
pfam Rep_309_c_120 Rep_309_c_120_10 14859 15971 + HGSNAT_cat
TC Rep_309_c_120 Rep_309_c_120_11 16032 16412 + 2.A.7.34.3
TC Rep_309_c_120 Rep_309_c_120_12 16726 19755 + 1.B.14.6.1
pfam Rep_309_c_120 Rep_309_c_120_13 19767 21431 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_309_c_120 Rep_309_c_120_14 21520 22968 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_309_c_120 Rep_309_c_120_15 23113 24441 + GH28
CAZyme Rep_309_c_120 Rep_309_c_120_16 24438 27800 + GH89
Gene ID: Rep_309_c_120_7
Type: TC
Location: 10405 - 11637 (+)
Gene ID: Rep_309_c_120_8
Type: STP
Location: 11642 - 12559 (+)
Gene ID: Rep_309_c_120_9
Type: CAZyme
Location: 12531 - 14777 (-)
Gene ID: Rep_309_c_120_10
Type: pfam
Location: 14859 - 15971 (+)
Gene ID: Rep_309_c_120_11
Type: TC
Location: 16032 - 16412 (+)
Gene ID: Rep_309_c_120_12
Type: TC
Location: 16726 - 19755 (+)
Gene ID: Rep_309_c_120_13
Type: pfam
Location: 19767 - 21431 (+)
Gene ID: Rep_309_c_120_14
Type:
Location: 21520 - 22968 (+)
Gene ID: Rep_309_c_120_15
Type: CAZyme
Location: 23113 - 24441 (+)
Gene ID: Rep_309_c_120_16
Type: CAZyme
Location: 24438 - 27800 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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