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Cluster: Rep_309_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_309_c_118 Rep_309_c_118_39 41734 42741 + 1.A.23.2.1
STP Rep_309_c_118 Rep_309_c_118_40 42764 44272 - Pyr_redox_2
pfam Rep_309_c_118 Rep_309_c_118_41 44269 45030 - DHODB_Fe-S_bind
TC Rep_309_c_118 Rep_309_c_118_42 45042 45749 - 3.A.25.1.1
CAZyme Rep_309_c_118 Rep_309_c_118_43 45869 47296 + GH13_28
pfam Rep_309_c_118 Rep_309_c_118_44 47506 47778 + Cpn10
pfam Rep_309_c_118 Rep_309_c_118_45 47873 49510 + Cpn60_TCP1
TC Rep_309_c_118 Rep_309_c_118_46 49692 50537 + 3.A.1.124.2
Gene ID: Rep_309_c_118_39
Type: TC
Location: 41734 - 42741 (+)
Gene ID: Rep_309_c_118_40
Type: STP
Location: 42764 - 44272 (-)
Gene ID: Rep_309_c_118_41
Type: pfam
Location: 44269 - 45030 (-)
Gene ID: Rep_309_c_118_42
Type: TC
Location: 45042 - 45749 (-)
Gene ID: Rep_309_c_118_43
Type: CAZyme
Location: 45869 - 47296 (+)
Gene ID: Rep_309_c_118_44
Type: pfam
Location: 47506 - 47778 (+)
Gene ID: Rep_309_c_118_45
Type: pfam
Location: 47873 - 49510 (+)
Gene ID: Rep_309_c_118_46
Type: TC
Location: 49692 - 50537 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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