Cluster: Rep_309_CGC30
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_309
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_309_c_88 | Rep_309_c_88_1 | 41 | 1888 | - | GH127 |
| CAZyme | Rep_309_c_88 | Rep_309_c_88_2 | 2189 | 4237 | - | GH97 |
| CAZyme | Rep_309_c_88 | Rep_309_c_88_3 | 4262 | 6241 | - | CE20 | CE20 |
| pfam | Rep_309_c_88 | Rep_309_c_88_4 | 6248 | 7174 | - | SusF_SusE |
| CAZyme | Rep_309_c_88 | Rep_309_c_88_5 | 7187 | 8596 | - | GH27 |
| pfam | Rep_309_c_88 | Rep_309_c_88_6 | 8712 | 10226 | - | SusF_SusE | SusF_SusE |
| pfam | Rep_309_c_88 | Rep_309_c_88_7 | 10300 | 12027 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_309_c_88 | Rep_309_c_88_8 | 12047 | 15355 | - | 1.B.14.6.1 |
Gene ID: Rep_309_c_88_1
Type: CAZyme
Location: 41 - 1888 (-)
Type: CAZyme
Location: 41 - 1888 (-)
Gene ID: Rep_309_c_88_2
Type: CAZyme
Location: 2189 - 4237 (-)
Type: CAZyme
Location: 2189 - 4237 (-)
Gene ID: Rep_309_c_88_3
Type: CAZyme
Location: 4262 - 6241 (-)
Type: CAZyme
Location: 4262 - 6241 (-)
Gene ID: Rep_309_c_88_4
Type: pfam
Location: 6248 - 7174 (-)
Type: pfam
Location: 6248 - 7174 (-)
Gene ID: Rep_309_c_88_5
Type: CAZyme
Location: 7187 - 8596 (-)
Type: CAZyme
Location: 7187 - 8596 (-)
Gene ID: Rep_309_c_88_6
Type: pfam
Location: 8712 - 10226 (-)
Type: pfam
Location: 8712 - 10226 (-)
Gene ID: Rep_309_c_88_7
Type: pfam
Location: 10300 - 12027 (-)
Type: pfam
Location: 10300 - 12027 (-)
Gene ID: Rep_309_c_88_8
Type: TC
Location: 12047 - 15355 (-)
Type: TC
Location: 12047 - 15355 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.