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Cluster: Rep_309_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_309_c_79 Rep_309_c_79_2 112 1701 - CBM32 | GH43_24
CAZyme Rep_309_c_79 Rep_309_c_79_3 1762 4071 - GH105 | GH154
TF Rep_309_c_79 Rep_309_c_79_4 4139 4546 - HTH_AraC | HTH_AraC
STP Rep_309_c_79 Rep_309_c_79_5 4498 8235 - HATPase_c | HisKA | Response_reg | Y_Y_Y
TC Rep_309_c_79 Rep_309_c_79_6 8859 12149 + 1.B.14.6.1
pfam Rep_309_c_79 Rep_309_c_79_7 12165 14273 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_309_c_79 Rep_309_c_79_8 14378 15202 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_309_c_79 Rep_309_c_79_9 15309 16910 + GH16_3
Gene ID: Rep_309_c_79_2
Type: CAZyme
Location: 112 - 1701 (-)
Gene ID: Rep_309_c_79_3
Type: CAZyme
Location: 1762 - 4071 (-)
Gene ID: Rep_309_c_79_4
Type: TF
Location: 4139 - 4546 (-)
Gene ID: Rep_309_c_79_5
Type: STP
Location: 4498 - 8235 (-)
Gene ID: Rep_309_c_79_6
Type: TC
Location: 8859 - 12149 (+)
Gene ID: Rep_309_c_79_7
Type: pfam
Location: 12165 - 14273 (+)
Gene ID: Rep_309_c_79_8
Type:
Location: 14378 - 15202 (+)
Gene ID: Rep_309_c_79_9
Type: CAZyme
Location: 15309 - 16910 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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