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Cluster: Rep_309_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_309_c_48 Rep_309_c_48_9 11584 13338 - GH67
CAZyme Rep_309_c_48 Rep_309_c_48_10 13335 14306 - GH43_1
CAZyme Rep_309_c_48 Rep_309_c_48_11 14324 15454 - GH10
TC Rep_309_c_48 Rep_309_c_48_12 15486 16922 - 2.A.2.3.2
CAZyme Rep_309_c_48 Rep_309_c_48_13 16950 18731 - GH35
CAZyme Rep_309_c_48 Rep_309_c_48_14 18747 21056 - GH10
pfam Rep_309_c_48 Rep_309_c_48_15 21094 22515 - SGBP_B_XBD
pfam Rep_309_c_48 Rep_309_c_48_16 22533 24224 - SusD_RagB | SusD-like_3
TC Rep_309_c_48 Rep_309_c_48_17 24240 27395 - 1.B.14.6.1
Gene ID: Rep_309_c_48_9
Type: CAZyme
Location: 11584 - 13338 (-)
Gene ID: Rep_309_c_48_10
Type: CAZyme
Location: 13335 - 14306 (-)
Gene ID: Rep_309_c_48_11
Type: CAZyme
Location: 14324 - 15454 (-)
Gene ID: Rep_309_c_48_12
Type: TC
Location: 15486 - 16922 (-)
Gene ID: Rep_309_c_48_13
Type: CAZyme
Location: 16950 - 18731 (-)
Gene ID: Rep_309_c_48_14
Type: CAZyme
Location: 18747 - 21056 (-)
Gene ID: Rep_309_c_48_15
Type: pfam
Location: 21094 - 22515 (-)
Gene ID: Rep_309_c_48_16
Type: pfam
Location: 22533 - 24224 (-)
Gene ID: Rep_309_c_48_17
Type: TC
Location: 24240 - 27395 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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