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Cluster: Rep_309_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_309_c_45 Rep_309_c_45_1 240 3611 + 1.B.14.6.1
pfam Rep_309_c_45 Rep_309_c_45_2 3618 5324 + SusD_RagB | SusD-like_3
CAZyme Rep_309_c_45 Rep_309_c_45_3 5403 6917 + GH30
NULL(UNKNOWN) Rep_309_c_45 Rep_309_c_45_4 6945 9413 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_309_c_45 Rep_309_c_45_5 9500 10024 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_309_c_45 Rep_309_c_45_6 10035 12242 + GH36
CAZyme Rep_309_c_45 Rep_309_c_45_7 12270 15278 + GH97
NULL(UNKNOWN) Rep_309_c_45 Rep_309_c_45_8 15263 15907 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_309_c_45 Rep_309_c_45_9 16079 17746 - 4.C.1.1.4
Gene ID: Rep_309_c_45_1
Type: TC
Location: 240 - 3611 (+)
Gene ID: Rep_309_c_45_2
Type: pfam
Location: 3618 - 5324 (+)
Gene ID: Rep_309_c_45_3
Type: CAZyme
Location: 5403 - 6917 (+)
Gene ID: Rep_309_c_45_4
Type:
Location: 6945 - 9413 (+)
Gene ID: Rep_309_c_45_5
Type:
Location: 9500 - 10024 (+)
Gene ID: Rep_309_c_45_6
Type: CAZyme
Location: 10035 - 12242 (+)
Gene ID: Rep_309_c_45_7
Type: CAZyme
Location: 12270 - 15278 (+)
Gene ID: Rep_309_c_45_8
Type:
Location: 15263 - 15907 (-)
Gene ID: Rep_309_c_45_9
Type: TC
Location: 16079 - 17746 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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