Cluster: Rep_309_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_309
- CGC Family ID: CGCFAM_00574
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_309_c_33 | Rep_309_c_33_1 | 3 | 2984 | + | 1.B.14.6.1 |
| TC | Rep_309_c_33 | Rep_309_c_33_2 | 3061 | 4728 | + | 8.A.46.1.4 |
| NULL(UNKNOWN) | Rep_309_c_33 | Rep_309_c_33_3 | 4807 | 6576 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_309_c_33 | Rep_309_c_33_4 | 6590 | 8716 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_309_c_33 | Rep_309_c_33_5 | 8742 | 10472 | + | GH5_4 |
| pfam | Rep_309_c_33 | Rep_309_c_33_6 | 10665 | 12146 | + | FGGY_N | FGGY_C |
| pfam | Rep_309_c_33 | Rep_309_c_33_7 | 12167 | 13486 | + | AP_endonuc_2 |
| TC | Rep_309_c_33 | Rep_309_c_33_8 | 13639 | 15111 | + | 2.A.1.1.3 |
Gene ID: Rep_309_c_33_1
Type: TC
Location: 3 - 2984 (+)
Type: TC
Location: 3 - 2984 (+)
Gene ID: Rep_309_c_33_2
Type: TC
Location: 3061 - 4728 (+)
Type: TC
Location: 3061 - 4728 (+)
Gene ID: Rep_309_c_33_3
Type:
Location: 4807 - 6576 (+)
Type:
Location: 4807 - 6576 (+)
Gene ID: Rep_309_c_33_4
Type:
Location: 6590 - 8716 (+)
Type:
Location: 6590 - 8716 (+)
Gene ID: Rep_309_c_33_5
Type: CAZyme
Location: 8742 - 10472 (+)
Type: CAZyme
Location: 8742 - 10472 (+)
Gene ID: Rep_309_c_33_6
Type: pfam
Location: 10665 - 12146 (+)
Type: pfam
Location: 10665 - 12146 (+)
Gene ID: Rep_309_c_33_7
Type: pfam
Location: 12167 - 13486 (+)
Type: pfam
Location: 12167 - 13486 (+)
Gene ID: Rep_309_c_33_8
Type: TC
Location: 13639 - 15111 (+)
Type: TC
Location: 13639 - 15111 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.