Cluster: Rep_3077_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_3 | Rep_3077_c_3_66 | 76666 | 78024 | + | 9.B.18.1.3 |
| CAZyme | Rep_3077_c_3 | Rep_3077_c_3_67 | 78024 | 78842 | + | GT2 |
| CAZyme | Rep_3077_c_3 | Rep_3077_c_3_68 | 78861 | 79931 | + | GT4 |
| CAZyme | Rep_3077_c_3 | Rep_3077_c_3_69 | 79938 | 80879 | + | GT2 |
| CAZyme | Rep_3077_c_3 | Rep_3077_c_3_70 | 80888 | 81886 | + | GT2 |
Gene ID: Rep_3077_c_3_66
Type: TC
Location: 76666 - 78024 (+)
Type: TC
Location: 76666 - 78024 (+)
Gene ID: Rep_3077_c_3_67
Type: CAZyme
Location: 78024 - 78842 (+)
Type: CAZyme
Location: 78024 - 78842 (+)
Gene ID: Rep_3077_c_3_68
Type: CAZyme
Location: 78861 - 79931 (+)
Type: CAZyme
Location: 78861 - 79931 (+)
Gene ID: Rep_3077_c_3_69
Type: CAZyme
Location: 79938 - 80879 (+)
Type: CAZyme
Location: 79938 - 80879 (+)
Gene ID: Rep_3077_c_3_70
Type: CAZyme
Location: 80888 - 81886 (+)
Type: CAZyme
Location: 80888 - 81886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.