Cluster: Rep_3077_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: Rep_3077
- CGC Family ID: CGCFAM_00078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_2 | Rep_3077_c_2_143 | 178156 | 178722 | + | 2.A.88.3.1 |
| CAZyme | Rep_3077_c_2 | Rep_3077_c_2_144 | 179568 | 182651 | - | GH2 |
| pfam | Rep_3077_c_2 | Rep_3077_c_2_145 | 182766 | 183461 | - | MFS_2 |
| TC | Rep_3077_c_2 | Rep_3077_c_2_146 | 183458 | 183796 | - | 2.A.2.3.2 |
Gene ID: Rep_3077_c_2_143
Type: TC
Location: 178156 - 178722 (+)
Type: TC
Location: 178156 - 178722 (+)
Gene ID: Rep_3077_c_2_144
Type: CAZyme
Location: 179568 - 182651 (-)
Type: CAZyme
Location: 179568 - 182651 (-)
Gene ID: Rep_3077_c_2_145
Type: pfam
Location: 182766 - 183461 (-)
Type: pfam
Location: 182766 - 183461 (-)
Gene ID: Rep_3077_c_2_146
Type: TC
Location: 183458 - 183796 (-)
Type: TC
Location: 183458 - 183796 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.