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Cluster: Rep_3077_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3077_c_2 Rep_3077_c_2_104 129407 131989 - GT51
NULL(UNKNOWN) Rep_3077_c_2 Rep_3077_c_2_105 132228 132602 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3077_c_2 Rep_3077_c_2_106 132833 134611 - 2.A.58.2.2
NULL(UNKNOWN) Rep_3077_c_2 Rep_3077_c_2_107 134877 134993 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_3077_c_2 Rep_3077_c_2_108 135356 136012 - C60.UPA
TC Rep_3077_c_2 Rep_3077_c_2_109 136077 137075 - 2.A.58.2.2
TF Rep_3077_c_2 Rep_3077_c_2_110 137280 137789 + MarR
TC Rep_3077_c_2 Rep_3077_c_2_111 137773 140070 + 3.A.1.135.6
TC Rep_3077_c_2 Rep_3077_c_2_112 140072 141883 + 3.A.1.135.6
Gene ID: Rep_3077_c_2_104
Type: CAZyme
Location: 129407 - 131989 (-)
Gene ID: Rep_3077_c_2_105
Type:
Location: 132228 - 132602 (+)
Gene ID: Rep_3077_c_2_106
Type: TC
Location: 132833 - 134611 (-)
Gene ID: Rep_3077_c_2_107
Type:
Location: 134877 - 134993 (-)
Gene ID: Rep_3077_c_2_108
Type: peptidase
Location: 135356 - 136012 (-)
Gene ID: Rep_3077_c_2_109
Type: TC
Location: 136077 - 137075 (-)
Gene ID: Rep_3077_c_2_110
Type: TF
Location: 137280 - 137789 (+)
Gene ID: Rep_3077_c_2_111
Type: TC
Location: 137773 - 140070 (+)
Gene ID: Rep_3077_c_2_112
Type: TC
Location: 140072 - 141883 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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