Cluster: Rep_3077_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3077_c_37 | Rep_3077_c_37_1 | 2 | 1108 | - | GH13_4 |
| CAZyme | Rep_3077_c_37 | Rep_3077_c_37_2 | 1115 | 3361 | - | GH36 |
| TC | Rep_3077_c_37 | Rep_3077_c_37_3 | 3471 | 4307 | - | 3.A.1.1.36 |
| TC | Rep_3077_c_37 | Rep_3077_c_37_4 | 4311 | 5195 | - | 3.A.1.1.25 |
| TC | Rep_3077_c_37 | Rep_3077_c_37_5 | 5219 | 6496 | - | 3.A.1.1.44 |
Gene ID: Rep_3077_c_37_1
Type: CAZyme
Location: 2 - 1108 (-)
Type: CAZyme
Location: 2 - 1108 (-)
Gene ID: Rep_3077_c_37_2
Type: CAZyme
Location: 1115 - 3361 (-)
Type: CAZyme
Location: 1115 - 3361 (-)
Gene ID: Rep_3077_c_37_3
Type: TC
Location: 3471 - 4307 (-)
Type: TC
Location: 3471 - 4307 (-)
Gene ID: Rep_3077_c_37_4
Type: TC
Location: 4311 - 5195 (-)
Type: TC
Location: 4311 - 5195 (-)
Gene ID: Rep_3077_c_37_5
Type: TC
Location: 5219 - 6496 (-)
Type: TC
Location: 5219 - 6496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.