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Cluster: Rep_3077_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3077_c_1 Rep_3077_c_1_164 187601 189058 - 2.A.66.2.16
NULL(UNKNOWN) Rep_3077_c_1 Rep_3077_c_1_165 189055 190263 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3077_c_1 Rep_3077_c_1_166 190272 191156 - GT2
CAZyme Rep_3077_c_1 Rep_3077_c_1_167 191153 192379 - GT4
CAZyme Rep_3077_c_1 Rep_3077_c_1_168 192376 193680 - GT4
CAZyme Rep_3077_c_1 Rep_3077_c_1_169 193714 194862 - GT4
NULL(UNKNOWN) Rep_3077_c_1 Rep_3077_c_1_170 194892 195941 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_3077_c_1 Rep_3077_c_1_171 196909 198252 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3077_c_1 Rep_3077_c_1_172 198289 199047 - 9.B.18.1.1
Gene ID: Rep_3077_c_1_164
Type: TC
Location: 187601 - 189058 (-)
Gene ID: Rep_3077_c_1_165
Type:
Location: 189055 - 190263 (-)
Gene ID: Rep_3077_c_1_166
Type: CAZyme
Location: 190272 - 191156 (-)
Gene ID: Rep_3077_c_1_167
Type: CAZyme
Location: 191153 - 192379 (-)
Gene ID: Rep_3077_c_1_168
Type: CAZyme
Location: 192376 - 193680 (-)
Gene ID: Rep_3077_c_1_169
Type: CAZyme
Location: 193714 - 194862 (-)
Gene ID: Rep_3077_c_1_170
Type:
Location: 194892 - 195941 (-)
Gene ID: Rep_3077_c_1_171
Type:
Location: 196909 - 198252 (-)
Gene ID: Rep_3077_c_1_172
Type: TC
Location: 198289 - 199047 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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