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Cluster: Rep_3077_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3077_c_23 Rep_3077_c_23_1 587 3202 + CBM67 | GH78
pfam Rep_3077_c_23 Rep_3077_c_23_2 3313 4161 - AP_endonuc_2
CAZyme Rep_3077_c_23 Rep_3077_c_23_3 4165 5979 - CBM32 | GH43_28
CAZyme Rep_3077_c_23 Rep_3077_c_23_4 5984 8191 - GH2
pfam Rep_3077_c_23 Rep_3077_c_23_5 8273 9763 - MFS_2
CAZyme Rep_3077_c_23 Rep_3077_c_23_6 9992 11293 + GH1
STP Rep_3077_c_23 Rep_3077_c_23_7 11348 11884 - TetR_N
sulfatase Rep_3077_c_23 Rep_3077_c_23_8 12079 13086 + S1_2
TC Rep_3077_c_23 Rep_3077_c_23_9 13162 14508 + 2.A.66.1.32
Gene ID: Rep_3077_c_23_1
Type: CAZyme
Location: 587 - 3202 (+)
Gene ID: Rep_3077_c_23_2
Type: pfam
Location: 3313 - 4161 (-)
Gene ID: Rep_3077_c_23_3
Type: CAZyme
Location: 4165 - 5979 (-)
Gene ID: Rep_3077_c_23_4
Type: CAZyme
Location: 5984 - 8191 (-)
Gene ID: Rep_3077_c_23_5
Type: pfam
Location: 8273 - 9763 (-)
Gene ID: Rep_3077_c_23_6
Type: CAZyme
Location: 9992 - 11293 (+)
Gene ID: Rep_3077_c_23_7
Type: STP
Location: 11348 - 11884 (-)
Gene ID: Rep_3077_c_23_8
Type: sulfatase
Location: 12079 - 13086 (+)
Gene ID: Rep_3077_c_23_9
Type: TC
Location: 13162 - 14508 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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