Cluster: Rep_3077_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_21 | Rep_3077_c_21_10 | 10063 | 11010 | + | 3.A.1.1.10 |
| TC | Rep_3077_c_21 | Rep_3077_c_21_11 | 11026 | 11940 | + | 3.A.1.1.29 |
| STP | Rep_3077_c_21 | Rep_3077_c_21_12 | 12171 | 13829 | + | SBP_bac_1 |
| CAZyme | Rep_3077_c_21 | Rep_3077_c_21_13 | 13856 | 15334 | + | GH32 |
Gene ID: Rep_3077_c_21_10
Type: TC
Location: 10063 - 11010 (+)
Type: TC
Location: 10063 - 11010 (+)
Gene ID: Rep_3077_c_21_11
Type: TC
Location: 11026 - 11940 (+)
Type: TC
Location: 11026 - 11940 (+)
Gene ID: Rep_3077_c_21_12
Type: STP
Location: 12171 - 13829 (+)
Type: STP
Location: 12171 - 13829 (+)
Gene ID: Rep_3077_c_21_13
Type: CAZyme
Location: 13856 - 15334 (+)
Type: CAZyme
Location: 13856 - 15334 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.