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Cluster: Rep_3077_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3077_c_20 Rep_3077_c_20_17 19377 21644 + CBM48 | GH13_9
pfam Rep_3077_c_20 Rep_3077_c_20_18 21731 22924 + NTP_transferase | Hexapep_GlmU
pfam Rep_3077_c_20 Rep_3077_c_20_19 22918 24045 + NTP_transferase | Hexapep_GlmU
CAZyme Rep_3077_c_20 Rep_3077_c_20_20 24210 25628 + GT5
pfam Rep_3077_c_20 Rep_3077_c_20_21 25967 26227 + ATPase_gene1
pfam Rep_3077_c_20 Rep_3077_c_20_22 26243 26746 + ATP-synt_I
TC Rep_3077_c_20 Rep_3077_c_20_23 26747 27490 + 3.A.2.1.5
TC Rep_3077_c_20 Rep_3077_c_20_24 27542 27823 + 3.A.2.1.2
pfam Rep_3077_c_20 Rep_3077_c_20_25 27861 28367 + ATP-synt_B
pfam Rep_3077_c_20 Rep_3077_c_20_26 28364 28903 + OSCP
TC Rep_3077_c_20 Rep_3077_c_20_27 28994 30514 + 3.A.2.1.5
TC Rep_3077_c_20 Rep_3077_c_20_28 30534 31382 + 3.A.2.1.5
TC Rep_3077_c_20 Rep_3077_c_20_29 31408 32802 + 3.A.2.1.5
Gene ID: Rep_3077_c_20_17
Type: CAZyme
Location: 19377 - 21644 (+)
Gene ID: Rep_3077_c_20_18
Type: pfam
Location: 21731 - 22924 (+)
Gene ID: Rep_3077_c_20_19
Type: pfam
Location: 22918 - 24045 (+)
Gene ID: Rep_3077_c_20_20
Type: CAZyme
Location: 24210 - 25628 (+)
Gene ID: Rep_3077_c_20_21
Type: pfam
Location: 25967 - 26227 (+)
Gene ID: Rep_3077_c_20_22
Type: pfam
Location: 26243 - 26746 (+)
Gene ID: Rep_3077_c_20_23
Type: TC
Location: 26747 - 27490 (+)
Gene ID: Rep_3077_c_20_24
Type: TC
Location: 27542 - 27823 (+)
Gene ID: Rep_3077_c_20_25
Type: pfam
Location: 27861 - 28367 (+)
Gene ID: Rep_3077_c_20_26
Type: pfam
Location: 28364 - 28903 (+)
Gene ID: Rep_3077_c_20_27
Type: TC
Location: 28994 - 30514 (+)
Gene ID: Rep_3077_c_20_28
Type: TC
Location: 30534 - 31382 (+)
Gene ID: Rep_3077_c_20_29
Type: TC
Location: 31408 - 32802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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