Cluster: Rep_3077_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_11 | Rep_3077_c_11_17 | 18270 | 19214 | + | 2.A.28.2.4 |
| TC | Rep_3077_c_11 | Rep_3077_c_11_18 | 19297 | 20862 | - | 2.A.2.3.2 |
| CAZyme | Rep_3077_c_11 | Rep_3077_c_11_19 | 20953 | 23979 | - | GH3 |
| CAZyme | Rep_3077_c_11 | Rep_3077_c_11_20 | 24090 | 26009 | - | GH2 |
Gene ID: Rep_3077_c_11_17
Type: TC
Location: 18270 - 19214 (+)
Type: TC
Location: 18270 - 19214 (+)
Gene ID: Rep_3077_c_11_18
Type: TC
Location: 19297 - 20862 (-)
Type: TC
Location: 19297 - 20862 (-)
Gene ID: Rep_3077_c_11_19
Type: CAZyme
Location: 20953 - 23979 (-)
Type: CAZyme
Location: 20953 - 23979 (-)
Gene ID: Rep_3077_c_11_20
Type: CAZyme
Location: 24090 - 26009 (-)
Type: CAZyme
Location: 24090 - 26009 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.