Cluster: Rep_3077_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_6 | Rep_3077_c_6_58 | 71356 | 72669 | + | 2.A.103.1.3 |
| CAZyme | Rep_3077_c_6 | Rep_3077_c_6_59 | 72725 | 73852 | + | GT28 |
| pfam | Rep_3077_c_6 | Rep_3077_c_6_60 | 73890 | 75437 | + | POTRA_1 |
| pfam | Rep_3077_c_6 | Rep_3077_c_6_61 | 75461 | 76939 | + | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_3077_c_6 | Rep_3077_c_6_62 | 77179 | 77406 | + | 3.D.1.6.4 |
Gene ID: Rep_3077_c_6_58
Type: TC
Location: 71356 - 72669 (+)
Type: TC
Location: 71356 - 72669 (+)
Gene ID: Rep_3077_c_6_59
Type: CAZyme
Location: 72725 - 73852 (+)
Type: CAZyme
Location: 72725 - 73852 (+)
Gene ID: Rep_3077_c_6_60
Type: pfam
Location: 73890 - 75437 (+)
Type: pfam
Location: 73890 - 75437 (+)
Gene ID: Rep_3077_c_6_61
Type: pfam
Location: 75461 - 76939 (+)
Type: pfam
Location: 75461 - 76939 (+)
Gene ID: Rep_3077_c_6_62
Type: TC
Location: 77179 - 77406 (+)
Type: TC
Location: 77179 - 77406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.