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Cluster: Rep_3077_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3077_c_4 Rep_3077_c_4_122 109928 111910 + GH42
TF Rep_3077_c_4 Rep_3077_c_4_123 112052 113083 + LacI
pfam Rep_3077_c_4 Rep_3077_c_4_124 113362 114642 + SBP_bac_8
TC Rep_3077_c_4 Rep_3077_c_4_125 114777 116225 + 3.A.1.1.27
TC Rep_3077_c_4 Rep_3077_c_4_126 116222 117130 + 3.A.1.1.27
Gene ID: Rep_3077_c_4_122
Type: CAZyme
Location: 109928 - 111910 (+)
Gene ID: Rep_3077_c_4_123
Type: TF
Location: 112052 - 113083 (+)
Gene ID: Rep_3077_c_4_124
Type: pfam
Location: 113362 - 114642 (+)
Gene ID: Rep_3077_c_4_125
Type: TC
Location: 114777 - 116225 (+)
Gene ID: Rep_3077_c_4_126
Type: TC
Location: 116222 - 117130 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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