Cluster: Rep_3077_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3077_c_4 | Rep_3077_c_4_106 | 91636 | 92559 | - | GT2 |
| CAZyme | Rep_3077_c_4 | Rep_3077_c_4_107 | 92580 | 93623 | - | GT2 |
| pfam | Rep_3077_c_4 | Rep_3077_c_4_108 | 93775 | 94425 | - | Hydrolase | HAD | HAD_2 |
| pfam | Rep_3077_c_4 | Rep_3077_c_4_109 | 94606 | 95790 | + | Patatin |
| TC | Rep_3077_c_4 | Rep_3077_c_4_110 | 95777 | 97408 | + | 8.A.7.1.5 |
Gene ID: Rep_3077_c_4_106
Type: CAZyme
Location: 91636 - 92559 (-)
Type: CAZyme
Location: 91636 - 92559 (-)
Gene ID: Rep_3077_c_4_107
Type: CAZyme
Location: 92580 - 93623 (-)
Type: CAZyme
Location: 92580 - 93623 (-)
Gene ID: Rep_3077_c_4_108
Type: pfam
Location: 93775 - 94425 (-)
Type: pfam
Location: 93775 - 94425 (-)
Gene ID: Rep_3077_c_4_109
Type: pfam
Location: 94606 - 95790 (+)
Type: pfam
Location: 94606 - 95790 (+)
Gene ID: Rep_3077_c_4_110
Type: TC
Location: 95777 - 97408 (+)
Type: TC
Location: 95777 - 97408 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.