Cluster: Rep_3077_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3077
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3077_c_1 | Rep_3077_c_1_8 | 9074 | 10927 | - | 9.B.34.1.2 |
| CAZyme | Rep_3077_c_1 | Rep_3077_c_1_9 | 11695 | 12546 | + | CE4 |
| TF | Rep_3077_c_1 | Rep_3077_c_1_10 | 12553 | 13398 | - | MerR |
| peptidase | Rep_3077_c_1 | Rep_3077_c_1_11 | 13553 | 14956 | - | M18.UPW |
| CAZyme | Rep_3077_c_1 | Rep_3077_c_1_12 | 14981 | 15646 | - | GH23 |
Gene ID: Rep_3077_c_1_8
Type: TC
Location: 9074 - 10927 (-)
Type: TC
Location: 9074 - 10927 (-)
Gene ID: Rep_3077_c_1_9
Type: CAZyme
Location: 11695 - 12546 (+)
Type: CAZyme
Location: 11695 - 12546 (+)
Gene ID: Rep_3077_c_1_10
Type: TF
Location: 12553 - 13398 (-)
Type: TF
Location: 12553 - 13398 (-)
Gene ID: Rep_3077_c_1_11
Type: peptidase
Location: 13553 - 14956 (-)
Type: peptidase
Location: 13553 - 14956 (-)
Gene ID: Rep_3077_c_1_12
Type: CAZyme
Location: 14981 - 15646 (-)
Type: CAZyme
Location: 14981 - 15646 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp003449675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.